A spatial transcription database site for diseases of human systems

About this data set


Accession NO. GSE174749
Cell Count
Technique
PMID 35046414
Title GeoMx Cancer Transcriptome Atlas (CTA) mRNA assay on 191 ROIs from a NSCLC tumor.
Organism Homo sapiens
Overall design One NSCLC tumor was profiled with the GeoMx Cancer Transcriptome Altas RNA assay. 191 ROIs were chosen, and tumor (PanCK+) and microenvironment (PanCK-) AOIs were collected from each ROI.
Summary Dense spatial gene expression profiling of a NSCLC tumor. This study was part of Danaher & Kim et al., "Advances in mixed cell deconvolution enable quantification of cell types in spatially resolved gene expression data"